Basic Information
Locus ID:
evm.TU.utg000004l.204
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000004l | 1783663 | 1791160 | + | evm.TU.utg000004l.204 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 101,162.87 Da | 45.89 | 68.88 | -0.90 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 657 | 703 | 0.00960255 | IPR002999 |
| SUPERFAMILY | SSF48371 | ARM repeat | 61 | 287 | 4.46E-8 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 654 | 694 | 1.35E-6 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 653 | 703 | 7.8E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 851 | 885 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 538 | 565 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 761 | 795 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 658 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 728 | 759 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 352 | 395 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 933 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 813 | 850 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 439 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 484 | 523 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 657 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 933 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021686080.1 | serine/arginine repetitive matrix protein 2-like isoform X1 [Hevea brasiliensis] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2LRD6 | Tudor domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology