Basic Information
Locus ID:
evm.TU.utg000004l.168
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000004l | 1458133 | 1461051 | + | evm.TU.utg000004l.168 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.83 | 69,507.77 Da | 42.42 | 107.33 | 0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 251 | 274 | 0.052 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 226 | 249 | 0.0021 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 597 | 618 | 1.5 | IPR001611 |
| Pfam | PF00646 | F-box domain | 66 | 107 | 1.3E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 573 | 592 | 0.082 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 185 | 651 | 1.33E-40 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 63 | 104 | 2.35E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 542 | 654 | 1.2E-16 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 60 | 107 | 1.8E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 455 | 541 | 6.8E-13 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 174 | 411 | 4.8E-52 | IPR032675 |
| SMART | SM00367 | LRR_CC_2 | 252 | 277 | 5.4E-5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 358 | 383 | 0.12 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 464 | 489 | 0.004 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 226 | 251 | 7.1E-7 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 547 | 569 | 160.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 570 | 594 | 0.043 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 200 | 225 | 0.0056 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 517 | 544 | 220.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 278 | 303 | 0.42 | IPR006553 |
| SMART | SM00256 | fbox_2 | 70 | 110 | 3.6E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 596 | 621 | 0.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 410 | 435 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 490 | 515 | 0.58 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 384 | 409 | 0.0055 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021605992.1 | EIN3-binding F-box protein 1 [Manihot esculenta] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2K6Y0 | Grr1 plant OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology