Basic Information
Locus ID:
evm.TU.utg000003l.695
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 7526935 | 7528070 | - | evm.TU.utg000003l.695 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.81 | 11,894.01 Da | 50.69 | 62.43 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16116 | Ubl_Smt3_like | 29 | 102 | 1.88159E-45 | - |
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 31 | 101 | 3.7E-23 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 17 | 106 | 5.56E-27 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 29 | 108 | 1.6E-38 | - |
| SMART | SM00213 | ubq_7 | 31 | 102 | 2.6E-13 | IPR000626 |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 29 | 106 | 16.559401 | IPR000626 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G26840.1 | small ubiquitin-like modifier 1. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. | 0 |
| RefSeq | XP_021649660.1 | small ubiquitin-related modifier 1-like [Hevea brasiliensis] | 0 |
| P55852 | Small ubiquitin-related modifier 1 OS=Arabidopsis thaliana OX=3702 GN=SUMO1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A6A6KUC4 | Small ubiquitin-related modifier OS=Hevea brasiliensis OX=3981 GN=GH714_026069 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology