Basic Information
Locus ID:
evm.TU.utg000003l.674
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 7395700 | 7401435 | + | evm.TU.utg000003l.674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.73 | 143,947.25 Da | 47.26 | 72.80 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1026 | 1283 | 1.33829E-107 | - |
| CDD | cd06410 | PB1_UP2 | 187 | 283 | 4.30184E-46 | - |
| Pfam | PF00564 | PB1 domain | 200 | 282 | 1.2E-20 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1022 | 1283 | 4.7E-63 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 199 | 286 | 2.42E-21 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1016 | 1282 | 1.22E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 202 | 284 | 3.7E-13 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1108 | 1308 | 4.7E-54 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1013 | 1107 | 2.8E-25 | - |
| SMART | SM00220 | serkin_6 | 1020 | 1289 | 3.5E-57 | IPR000719 |
| SMART | SM00666 | PB1_new | 198 | 285 | 3.6E-30 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1020 | 1290 | 40.315128 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1026 | 1051 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1145 | 1157 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1139 | 1157 | 2.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1254 | 1276 | 2.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1210 | 1232 | 2.9E-14 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1102 | 1115 | 2.9E-14 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 180 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 161 | 176 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G24715.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021630743.2 | uncharacterized protein LOC110628407 [Manihot esculenta] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2IMV1 | Uncharacterized protein MANES_12G042400 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology