Basic Information
Locus ID:
evm.TU.utg000003l.632
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 7051147 | 7054312 | - | evm.TU.utg000003l.632 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.29 | 64,824.25 Da | 57.88 | 57.66 | -1.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04438 | HIT zinc finger | 532 | 563 | 6.0E-7 | IPR007529 |
| Pfam | PF04795 | PAPA-1-like conserved region | 431 | 516 | 5.8E-20 | IPR006880 |
| SMART | SM01406 | PAPA_1_2 | 431 | 516 | 2.4E-32 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 485 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 423 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 182 | 203 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 111 | 160 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 316 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 300 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 450 | 496 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 326 | 373 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 241 | 270 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 390 | 404 | - | - |
| Coils | Coil | Coil | 469 | 489 | - | - |
| Coils | Coil | Coil | 420 | 457 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47350.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_021675821.1 | calponin homology domain-containing protein DDB_G0272472-like [Hevea brasiliensis] | 0 |
| TrEMBL | A0A2P2JCK1 | Uncharacterized protein LOC105642632 isoform X2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology