Basic Information
Locus ID:
evm.TU.utg000003l.30
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 259478 | 285334 | + | evm.TU.utg000003l.30 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.49 | 113,996.05 Da | 32.64 | 87.64 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 711 | 973 | 3.32807E-99 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 707 | 971 | 1.7E-46 | IPR001245 |
| Pfam | PF11721 | Malectin domain | 438 | 622 | 9.5E-47 | IPR021720 |
| Pfam | PF13855 | Leucine rich repeat | 302 | 361 | 5.3E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 109 | 410 | 2.65E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 686 | 973 | 4.65E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 781 | 984 | 1.3E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 666 | 780 | 3.2E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 416 | 9.1E-24 | IPR032675 |
| Gene3D | G3DSA:2.60.120.430 | - | 436 | 627 | 1.9E-37 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 45 | 288 | 3.0E-46 | IPR032675 |
| SMART | SM00220 | serkin_6 | 705 | 973 | 1.6E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 705 | 979 | 37.813408 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 825 | 837 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1006 | 1035 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56120.2 | - | 0 |
| RefSeq | XP_021615709.1 | probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Manihot esculenta] | 0 |
| C0LGH3 | Probable LRR receptor-like serine/threonine-protein kinase At1g56140 OS=Arabidopsis thaliana OX=3702 GN=At1g56140 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2C9VRR7 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_06G174700 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology