Basic Information
Locus ID:
evm.TU.utg000003l.269
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Seven transmembrane domain-containing tyrosine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 3149722 | 3154501 | + | evm.TU.utg000003l.269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 50,158.96 Da | 40.74 | 92.25 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 172 | 423 | 4.15525E-94 | - |
| Pfam | PF12796 | Ankyrin repeats (3 copies) | 68 | 146 | 3.8E-11 | IPR020683 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 170 | 423 | 1.4E-58 | IPR001245 |
| SUPERFAMILY | SSF48403 | Ankyrin repeat | 53 | 147 | 2.49E-21 | IPR036770 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 162 | 424 | 3.91E-73 | IPR011009 |
| Gene3D | G3DSA:1.25.40.20 | - | 37 | 156 | 9.8E-23 | IPR036770 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 157 | 431 | 2.0E-75 | - |
| SMART | SM00248 | ANK_2a | 119 | 149 | 2300.0 | IPR002110 |
| SMART | SM00248 | ANK_2a | 86 | 115 | 1.2E-5 | IPR002110 |
| SMART | SM00248 | ANK_2a | 53 | 82 | 2800.0 | IPR002110 |
| PIRSF | PIRSF000654 | ILK | 38 | 437 | 3.0E-117 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 166 | 431 | 43.72142 | IPR000719 |
| ProSiteProfiles | PS50297 | Ankyrin repeat region circular profile. | 86 | 118 | 12.7794 | - |
| ProSiteProfiles | PS50088 | Ankyrin repeat profile. | 86 | 118 | 14.15847 | IPR002110 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 172 | 193 | - | IPR017441 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 394 | 416 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 280 | 298 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 241 | 254 | 1.4E-12 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 349 | 371 | 1.4E-12 | IPR001245 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G18950.2 | - | 0 |
| RefSeq | XP_021653079.1 | serine/threonine-protein kinase STY8-like [Hevea brasiliensis] | 0 |
| Q93Z30 | Serine/threonine-protein kinase 12 OS=Arabidopsis thaliana OX=3702 GN=BHP PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9WP27 | Protein kinase domain-containing protein OS=Manihot esculenta OX=3983 GN=MANES_01G258200 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg29348 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30010930 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.1310.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri5G14906 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 2 | nbisL1-mrna-6135, nbisL1-mrna-9505 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00016722 |
| Rhizophoraceae | Bruguiera sexangula | 1 | evm.TU.Scaffold_9_RagTag.488 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-21756 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-7321, nbisL1-mrna-7322, nbisL1-mrna-7323 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000003l.269 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00017523 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-19640 |
| Salicaceae | Populus euphratica | 1 | populus_peu31675 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132610332 |
| Solanaceae | Solanum chilense | 1 | SOLCI005577300 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107032428 |