Basic Information
Locus ID:
evm.TU.utg000003l.262
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 2964262 | 2969438 | - | evm.TU.utg000003l.262 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.71 | 100,588.82 Da | 57.20 | 83.42 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 50 | 203 | 6.8172E-46 | - |
| CDD | cd16655 | RING-Ubox_WDSUB1_like | 830 | 871 | 6.21225E-24 | - |
| Pfam | PF04564 | U-box domain | 827 | 896 | 1.7E-17 | IPR003613 |
| Pfam | PF00069 | Protein kinase domain | 544 | 794 | 1.1E-39 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 522 | 803 | 2.56E-68 | IPR011009 |
| SUPERFAMILY | SSF57850 | RING/U-box | 823 | 895 | 4.5E-24 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 37 | 166 | 1.7E-5 | IPR014729 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 824 | 896 | 1.2E-28 | IPR013083 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 614 | 811 | 2.5E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 526 | 613 | 8.5E-26 | - |
| SMART | SM00220 | serkin_6 | 541 | 806 | 8.3E-34 | IPR000719 |
| SMART | SM00504 | Ubox_2 | 829 | 892 | 2.4E-30 | IPR003613 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 541 | 807 | 34.449516 | IPR000719 |
| ProSiteProfiles | PS51698 | U-box domain profile. | 825 | 896 | 38.852081 | IPR003613 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 547 | 568 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 659 | 671 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 321 | - | - |
| Coils | Coil | Coil | 371 | 391 | - | - |
| Coils | Coil | Coil | 458 | 506 | - | - |
| Coils | Coil | Coil | 412 | 443 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G45910.1 | U-box domain-containing protein kinase family protein. | 0 |
| RefSeq | XP_034926351.1 | U-box domain-containing protein 33-like [Populus alba] | 0 |
| Q8GUH1 | U-box domain-containing protein 33 OS=Arabidopsis thaliana OX=3702 GN=PUB33 PE=2 SV=2 | 0 | |
| TrEMBL | A0A2P2JS06 | U-box domain-containing protein 33 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology