Basic Information
Locus ID:
evm.TU.utg000003l.24
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
PB1 domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 197978 | 203257 | - | evm.TU.utg000003l.24 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 144,539.70 Da | 41.66 | 75.71 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 1028 | 1285 | 2.68019E-109 | - |
| CDD | cd06410 | PB1_UP2 | 188 | 284 | 3.84544E-42 | - |
| Pfam | PF00564 | PB1 domain | 202 | 284 | 4.9E-15 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1024 | 1285 | 1.9E-60 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 200 | 288 | 4.46E-19 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1013 | 1284 | 1.64E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1109 | 1300 | 1.4E-51 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 203 | 286 | 2.8E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1009 | 1108 | 2.2E-25 | - |
| SMART | SM00220 | serkin_6 | 1022 | 1288 | 7.5E-55 | IPR000719 |
| SMART | SM00666 | PB1_new | 199 | 286 | 8.2E-25 | IPR000270 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1022 | 1287 | 40.4282 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 1028 | 1053 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 1147 | 1159 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1141 | 1159 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1104 | 1117 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1256 | 1278 | 2.0E-13 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 1212 | 1234 | 2.0E-13 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 549 | 600 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 560 | 597 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79570.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 0 |
| RefSeq | XP_021639805.1 | uncharacterized protein LOC110634958 [Hevea brasiliensis] | 0 |
| Q9SAJ2 | RAF-like serine/threonine-protein kinase 20 OS=Arabidopsis thaliana OX=3702 GN=RAF20 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2JWA4 | Protein kinase domain-containing protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology