Basic Information
Locus ID:
evm.TU.utg000003l.118
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
spa1-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000003l | 1174299 | 1180208 | + | evm.TU.utg000003l.118 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 98,644.11 Da | 59.99 | 83.08 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 742 | 777 | 0.0059 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 656 | 693 | 9.1E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 569 | 879 | 1.44E-51 | IPR036322 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 37 | 339 | 7.01E-20 | IPR011009 |
| Gene3D | G3DSA:2.130.10.10 | - | 546 | 882 | 3.8E-120 | IPR015943 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 78 | 347 | 2.2E-24 | - |
| SMART | SM00220 | serkin_6 | 16 | 335 | 5.1E-5 | IPR000719 |
| SMART | SM00320 | WD40_4 | 614 | 650 | 47.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 696 | 735 | 0.25 | IPR001680 |
| SMART | SM00320 | WD40_4 | 653 | 693 | 8.9E-9 | IPR001680 |
| SMART | SM00320 | WD40_4 | 836 | 880 | 20.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 786 | 825 | 13.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 562 | 600 | 1.5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 739 | 777 | 2.0E-5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 746 | 779 | 11.778342 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 746 | 779 | 9.836508 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 335 | 13.163714 | IPR000719 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 660 | 698 | 10.627413 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 660 | 702 | 13.983944 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 764 | 778 | - | IPR019775 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 764 | 778 | 3.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 637 | 651 | 3.9E-6 | IPR020472 |
| PRINTS | PR00320 | G protein beta WD-40 repeat signature | 680 | 694 | 3.9E-6 | IPR020472 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 31 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G15354.3 | - | 0 |
| RefSeq | XP_002533551.2 | protein SPA1-RELATED 3 isoform X2 [Ricinus communis] | 0 |
| Q9LJR3 | Protein SPA1-RELATED 3 OS=Arabidopsis thaliana OX=3702 GN=SPA3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2MKL9 | Protein SPA1-RELATED 3 isoform X2 OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology