Basic Information
Locus ID:
evm.TU.utg000002l.640
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000002l | 6802191 | 6802923 | - | evm.TU.utg000002l.640 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.00 | 9,410.76 Da | 22.80 | 91.55 | 0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G07410.2 | Transducin family protein / WD-40 repeat family protein. | 0 |
| RefSeq | XP_018833793.1 | WD repeat-containing protein PCN [Juglans regia] | 0 |
| Q8RXU6 | WD repeat-containing protein PCN OS=Arabidopsis thaliana OX=3702 GN=PCN PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2LV92 | Transducin-related family protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-19285 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-19243 |
| Rhizophoraceae | Ceriops zippeliana | 1 | nbisL1-mrna-6663 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.640 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-13124 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-10083 |