Basic Information
Locus ID:
evm.TU.utg000002l.49
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000002l | 408883 | 414888 | + | evm.TU.utg000002l.49 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.80 | 85,908.39 Da | 46.71 | 78.31 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 16 | 161 | 2.22363E-60 | - |
| Pfam | PF00582 | Universal stress protein family | 17 | 150 | 2.0E-11 | IPR006016 |
| Pfam | PF00069 | Protein kinase domain | 455 | 710 | 2.9E-40 | IPR000719 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 17 | 158 | 7.28E-12 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 433 | 711 | 7.69E-69 | IPR011009 |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 158 | 3.9E-12 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 421 | 525 | 9.2E-25 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 526 | 733 | 1.0E-48 | - |
| SMART | SM00220 | serkin_6 | 453 | 722 | 1.9E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 453 | 729 | 35.820515 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 571 | 583 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 736 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 181 | 202 | - | - |
| Coils | Coil | Coil | 321 | 341 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021681652.1 | U-box domain-containing protein 52-like [Hevea brasiliensis] | 0 |
| Q9FKG6 | U-box domain-containing protein 52 OS=Arabidopsis thaliana OX=3702 GN=PUB52 PE=2 SV=1 | 0 | |
| TrEMBL | A0A067JYF2 | Protein kinase domain-containing protein OS=Jatropha curcas OX=180498 GN=JCGZ_22570 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology