Basic Information
Locus ID:
evm.TU.utg000002l.341
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000002l | 2474136 | 2476972 | + | evm.TU.utg000002l.341 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.12 | 39,527.67 Da | 48.27 | 77.25 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 128 | 239 | 5.6E-8 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 65 | 238 | 1.02E-27 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 123 | 2.6E-8 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 127 | 239 | 2.8E-20 | - |
| SMART | SM00220 | serkin_6 | 4 | 242 | 1.5E-6 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 242 | 8.965916 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 313 | 333 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 333 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71530.3 | - | 0 |
| RefSeq | XP_015577945.2 | probable serine/threonine-protein kinase At1g54610 [Ricinus communis] | 0 |
| Q9ZVM9 | Probable serine/threonine-protein kinase At1g54610 OS=Arabidopsis thaliana OX=3702 GN=At1g54610 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2H5NI44 | Protein kinase domain-containing protein OS=Citrus unshiu OX=55188 GN=CUMW_046790 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 2 | jg16965, jg39448 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.3358.V1.1 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000002l.341 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00011983 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-20313 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-18468 |