Basic Information
Locus ID:
evm.TU.utg000001l.343
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the ubiquitin-conjugating enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 12617351 | 12619686 | + | evm.TU.utg000001l.343 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.24 | 21,575.21 Da | 64.09 | 78.41 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00195 | UBCc | 44 | 182 | 7.13573E-75 | IPR000608 |
| Pfam | PF00179 | Ubiquitin-conjugating enzyme | 45 | 181 | 1.8E-52 | IPR000608 |
| SUPERFAMILY | SSF54495 | UBC-like | 35 | 187 | 1.44E-63 | IPR016135 |
| Gene3D | G3DSA:3.10.110.10 | Ubiquitin Conjugating Enzyme | 36 | 185 | 1.2E-67 | IPR016135 |
| SMART | SM00212 | ubc_7 | 44 | 187 | 5.4E-69 | - |
| ProSiteProfiles | PS50127 | Ubiquitin-conjugating (UBC) core domain profile. | 41 | 187 | 60.410213 | IPR000608 |
| ProSitePatterns | PS00183 | Ubiquitin-conjugating (UBC) active site signature. | 114 | 129 | - | IPR023313 |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G02760.1 | ubiquiting-conjugating enzyme 2. ubiquitin conjugating enzyme UBC2. Homolog of the yeast RAD6 gene. | 0 |
| RefSeq | XP_027369134.1 | ubiquitin-conjugating enzyme E2 2 isoform X2 [Abrus precatorius] | 0 |
| P42745 | Ubiquitin-conjugating enzyme E2 2 OS=Arabidopsis thaliana OX=3702 GN=UBC2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B8MPJ3 | ubiquitin-conjugating enzyme E2 2 isoform X2 OS=Abrus precatorius OX=3816 GN=LOC113874974 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology