Basic Information
Locus ID:
evm.TU.utg000001l.297
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Short Name:
WRKY4
Description:
WRKY transcription factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 12168255 | 12171769 | + | evm.TU.utg000001l.297 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.31 | 55,545.78 Da | 55.28 | 56.43 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 233 | 288 | 3.7E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 404 | 460 | 3.7E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 229 | 290 | 5.49E-26 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 395 | 463 | 1.16E-28 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 390 | 456 | 2.7E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 216 | 291 | 3.9E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 231 | 289 | 7.3E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 403 | 462 | 5.3E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 398 | 463 | 37.470329 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 226 | 290 | 23.651539 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 281 | 308 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 291 | 307 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 184 | 219 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 351 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 110 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 7 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 331 | 369 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021613186.1 | probable WRKY transcription factor 3 [Manihot esculenta] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2C9VWJ7 | WRKY transcription factor 3 OS=Manihot esculenta OX=3983 GN=MANES_05G106900 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology