Basic Information
Locus ID:
evm.TU.utg000001l.269
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 11887551 | 11891302 | + | evm.TU.utg000001l.269 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.11 | 115,635.59 Da | 38.59 | 89.77 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 685 | 5.8E-23 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 770 | 1011 | 9.4E-28 | IPR000719 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 95 | 261 | 1.8E-21 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 720 | 1012 | 1.34E-47 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 92 | 356 | 8.47E-41 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 685 | 7.3E-42 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 376 | 473 | 1.2E-10 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 720 | 813 | 1.9E-12 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 26 | 134 | 1.4E-9 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 814 | 1013 | 9.1E-41 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 475 | 703 | 1.4E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 137 | 366 | 4.6E-37 | - |
| SMART | SM00220 | serkin_6 | 746 | 1013 | 2.6E-10 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 401 | 692 | 21.319031 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 20 | 376 | 20.965681 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 710 | 1013 | 24.188234 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G57750.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_034890930.1 | wall-associated receptor kinase-like 22 [Populus alba] | 0 |
| Q8LGB6 | Non-functional pseudokinase ZED1 OS=Arabidopsis thaliana OX=3702 GN=ZED1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6M2ECL2 | Protein kinase domain-containing protein OS=Populus davidiana OX=266767 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah031726 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl54871 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000013396 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.2AG0000610, CQ.Regalona.r1.2BG0001920 ... |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30082680 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl06G0421 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_15_RagTag.538, evm.TU.Scaffold_15_RagTag.541 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-26696 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-15826, nbisL1-mrna-15827 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000001l.269 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00002464, Maker00002536, Maker00002600 |