Basic Information
Locus ID:
evm.TU.utg000001l.173
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 1702318 | 1705611 | + | evm.TU.utg000001l.173 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 88,215.44 Da | 39.00 | 85.83 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 634 | 746 | 2.5E-9 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 337 | 372 | 1.3E-4 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 34 | 67 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 444 | 1.96E-48 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 577 | 755 | 1.45E-27 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 629 | 765 | 3.8E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 335 | 459 | 1.2E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 550 | 628 | 1.4E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 331 | 4.6E-78 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 397 | 421 | 86.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 116 | 139 | 6.7E-4 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 191 | 215 | 190.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 590 | 752 | 1.7E-4 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 118 | 139 | 7.249913 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 596 | 618 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 792 | 824 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 474 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 460 | 488 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_021641290.1 | receptor protein kinase TMK1-like isoform X1 [Hevea brasiliensis] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2P2L8F0 | Receptor protein kinase OS=Rhizophora mucronata OX=61149 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology