Basic Information
Locus ID:
evm.TU.utg000001l.105
Species & Taxonomic ID:
Kandelia candel & 61147
Genome Assembly:
GCA_037832225.1
Description:
1-phosphatidylinositol-3-phosphate 5-kinase FAB1C
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| PERG.utg000001l | 971166 | 978359 | - | evm.TU.utg000001l.105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.54 | 195,275.81 Da | 49.56 | 73.88 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 383 | 655 | 3.91974E-131 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1475 | 1738 | 6.79195E-149 | IPR044769 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 405 | 645 | 8.4E-34 | IPR002423 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1514 | 1680 | 3.7E-34 | IPR002498 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1468 | 1738 | 2.13E-81 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 449 | 621 | 2.54E-40 | IPR027409 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 448 | 621 | 2.4E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1597 | 1739 | 4.3E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1449 | 1595 | 3.9E-36 | IPR027484 |
| SMART | SM00330 | PIPK_2 | 1450 | 1739 | 1.0E-114 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1418 | 1738 | 60.039429 | IPR002498 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 133 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1398 | 1418 | - | - |
| Coils | Coil | Coil | 1040 | 1060 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G71010.1 | FORMS APLOID AND BINUCLEATE CELLS 1C. Encodes a protein that is predicted to act as a phosphatidylinositol-3P 5-kinase, but, because it lacks a FYVE domain, it is unlikely to be efficiently targeted to membranes containing the proposed phosphatidylinositol-3P substrate. Therefore, its molecular function remains unknown. | 0 |
| RefSeq | XP_021647628.1 | LOW QUALITY PROTEIN: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Hevea brasiliensis] | 0 |
| Q9SSJ8 | Putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C OS=Arabidopsis thaliana OX=3702 GN=FAB1C PE=2 SV=1 | 0 | |
| TrEMBL | A0A2P2MG65 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Rhizophora mucronata OX=61149 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Network
No network data available for this species.
Orthology