halophFGD

Basic Information

Locus ID: evm.TU.LG26.946

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr26	23703830	23713724	+	evm.TU.LG26.946

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.87	14,434.70 Da	61.83	85.87	-0.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12678	RING-H2 zinc finger domain	61	98	1.8E-14	IPR024766
SUPERFAMILY	SSF57850	RING/U-box	67	99	5.05E-13	-
Gene3D	G3DSA:3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	31	105	8.1E-12	IPR013083

Gene Ontology

Molecular Function:

GO:0008270 (zinc ion binding)

KEGG Pathway

KO Term:

K10406 (kinesin family member C2/C3)

Best hit

Source	Best Hit ID	Description
TAIR	AT1G73860.1	P-loop containing nucleoside triphosphate hydrolases superfamily protein.
RefSeq	XP_048500473.1	kinesin-like protein KIN-14P [Beta vulgaris subsp. vulgaris]
Swiss-Prot	Q0WN69	Kinesin-like protein KIN-14P OS=Arabidopsis thaliana OX=3702 GN=KIN14P PE=2 SV=1
TrEMBL	A0A2J6M741	Calponin-homology (CH) domain-containing protein OS=Lactuca sativa OX=4236 GN=LSAT_8X147020 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Oryza coarctata	1	Oco11G011000
Portulacaceae	Portulaca oleracea	2	evm.TU.LG11.377, evm.TU.LG26.946