Basic Information
Locus ID:
evm.TU.LG26.920
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
receptor protein kinase TMK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 22504035 | 22507103 | + | evm.TU.LG26.920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.20 | 98,844.18 Da | 39.98 | 87.91 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 568 | 842 | 4.07325E-95 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 299 | 337 | 0.0031 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 565 | 839 | 1.5E-48 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 6 | 39 | 6.7E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 299 | 2.79E-43 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 301 | 411 | 1.28E-14 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 548 | 871 | 1.62E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 9 | 292 | 1.5E-67 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 639 | 865 | 1.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 299 | 425 | 6.4E-31 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 533 | 638 | 4.7E-35 | - |
| SMART | SM00220 | serkin_6 | 562 | 843 | 7.1E-41 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 562 | 843 | 40.018314 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 568 | 590 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 686 | 698 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010685103.2 | receptor-like kinase TMK4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RIU5 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_061690 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology