Basic Information
Locus ID:
evm.TU.LG26.542
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Lymphoid organ expressed yellow head virus receptor protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 9641625 | 9645780 | + | evm.TU.LG26.542 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.40 | 45,801.50 Da | 45.05 | 57.14 | -0.99 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 222 | 305 | 1.3E-26 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 140 | 170 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 309 | 327 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 201 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 356 | 382 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 383 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 19 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 242 | 270 | - | - |
| Coils | Coil | Coil | 237 | 267 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 0 |
| RefSeq | XP_010677584.1 | protein WVD2-like 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9DN14 | TPX2 domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology