Basic Information
Locus ID:
evm.TU.LG26.527
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 9390954 | 9395170 | - | evm.TU.LG26.527 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.95 | 70,254.65 Da | 39.21 | 99.01 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 48 | 88 | 2.7E-7 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 190 | 250 | 7.9E-10 | IPR001611 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 392 | 549 | 1.8E-22 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 393 | 645 | 1.68E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 277 | 6.05E-41 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 49 | 162 | 8.9E-28 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 368 | 466 | 2.2E-14 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 163 | 284 | 5.6E-33 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 467 | 648 | 1.2E-31 | - |
| SMART | SM00369 | LRR_typ_2 | 114 | 138 | 39.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 165 | 187 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 213 | 236 | 56.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 9.7 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 389 | 646 | 23.396729 | IPR000719 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 237 | 250 | 6.4E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 167 | 180 | 6.4E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51740.1 | inflorescence meristem receptor-like kinase 2. encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | 0 |
| RefSeq | XP_022017518.1 | probable leucine-rich repeat receptor-like protein kinase IMK3 [Helianthus annuus] | 0 |
| C0LGP9 | Probable leucine-rich repeat receptor-like protein kinase IMK3 OS=Arabidopsis thaliana OX=3702 GN=IMK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9A6M5 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Plumbaginaceae | Limonium bicolor | 1 | Lb4G26357 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG18.511, evm.TU.LG26.527 |