Basic Information
Locus ID:
evm.TU.LG26.521
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 9160290 | 9177792 | + | evm.TU.LG26.521 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 107,416.01 Da | 35.95 | 92.94 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13136 | MATE_DinF_like | 541 | 958 | 2.33329E-121 | IPR044644 |
| Pfam | PF01554 | MatE | 609 | 711 | 2.1E-10 | IPR002528 |
| Pfam | PF13839 | GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p | 190 | 477 | 1.9E-86 | IPR026057 |
| Pfam | PF14416 | PMR5 N terminal Domain | 135 | 189 | 1.9E-21 | IPR025846 |
| Pfam | PF01554 | MatE | 781 | 921 | 2.9E-15 | IPR002528 |
| TIGRFAM | TIGR00797 | matE: MATE efflux family protein | 533 | 938 | 1.1E-92 | IPR002528 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 89 | 134 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G38330.1 | MATE efflux family protein. | 0 |
| RefSeq | XP_021866078.1 | protein DETOXIFICATION 44, chloroplastic isoform X2 [Spinacia oleracea] | 0 |
| Q84K71 | Protein DETOXIFICATION 44, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=DTX44 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6V7NUE4 | Protein DETOXIFICATION OS=Ananas comosus var. bracteatus OX=296719 GN=CB5_LOCUS5259 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology