Basic Information
Locus ID:
evm.TU.LG26.502
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
PDC3
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 8901779 | 8906773 | - | evm.TU.LG26.502 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 63,496.69 Da | 31.56 | 87.10 | -0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 390 | 572 | 2.06202E-88 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 31 | 192 | 4.44373E-90 | - |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 436 | 560 | 2.2E-15 | IPR011766 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 28 | 194 | 2.2E-34 | IPR012001 |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 225 | 342 | 9.5E-21 | IPR012000 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 28 | 202 | 4.98E-43 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 390 | 583 | 9.11E-42 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 214 | 367 | 1.57E-33 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 25 | 200 | 6.7E-60 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 215 | 377 | 3.0E-42 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 383 | 574 | 7.9E-56 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 23 | 584 | 6.0E-211 | IPR012110 |
| ProSitePatterns | PS00187 | Thiamine pyrophosphate enzymes signature. | 449 | 468 | - | IPR000399 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01320.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_020239956.1 | pyruvate decarboxylase 2 isoform X2 [Cajanus cajan] | 0 |
| Q9M040 | Pyruvate decarboxylase 4 OS=Arabidopsis thaliana OX=3702 GN=PDC4 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9AB16 | pyruvate decarboxylase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology