Basic Information
Locus ID:
evm.TU.LG26.202
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box kelch-repeat protein At3g23880-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr26 | 2668587 | 2677294 | + | evm.TU.LG26.202 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.71 | 33,900.62 Da | 45.87 | 71.31 | -0.36 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_021836711.1 | putative F-box protein At3g16210 [Spinacia oleracea] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9S3S5 | F-box domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_002410 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 6 | gene_14979, gene_14980, gene_15000, gene_16994, gene_2093 ... |
| Amaranthaceae | Atriplex hortensis | 4 | Ah003124, Ah012204, Ah031133, Ah031136 |
| Amaranthaceae | Salicornia bigelovii | 4 | Sbi_jg26525, Sbi_jg26526, Sbi_jg29415, Sbi_jg34037 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg15056, Seu_jg6323 |
| Amaranthaceae | Suaeda aralocaspica | 4 | GOSA_00000790, GOSA_00000791, GOSA_00000792, GOSA_00011322 |
| Amaranthaceae | Suaeda glauca | 16 | Sgl12017, Sgl15992, Sgl31878, Sgl37156, Sgl46157, Sgl46158 ... |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000022421, gene:ENSEOMG00000034528 ... |
| Amaranthaceae | Chenopodium quinoa | 6 | CQ.Regalona.r1.1AG0000690, CQ.Regalona.r1.2BG0028260 ... |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG26.202 |