HalophFGD

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Basic Information
Locus ID: evm.TU.LG26.201
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
chr26 2648335 2649296 + evm.TU.LG26.201
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.16 33,132.88 Da 48.97 73.90 -0.40
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 32 202 9.5E-15 IPR017451
Best hit
Source Best Hit ID Description E-value
RefSeq XP_027171775.1 F-box protein CPR1-like [Coffea eugenioides] 0
TrEMBL A0A7C9EHC5 FBA_1 domain-containing protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Thinopyrum elongatum 1 Tel1E01G723400
Portulacaceae Portulaca oleracea 23 evm.TU.LG03.1144, evm.TU.LG03.179, evm.TU.LG03.180 ...
evm.TU.LG03.181, evm.TU.LG03.182, evm.TU.LG03.183, evm.TU.LG03.184, evm.TU.LG03.1951, evm.TU.LG03.200, evm.TU.LG04.1459, evm.TU.LG05.1983, evm.TU.LG12.1521, evm.TU.LG12.1534, evm.TU.LG12.1536, evm.TU.LG13.323, evm.TU.LG13.324, evm.TU.LG13.331, evm.TU.LG21.28, evm.TU.LG21.29, evm.TU.LG21.30, evm.TU.LG21.37, evm.TU.LG24.753, evm.TU.LG26.201
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.