Basic Information
Locus ID:
evm.TU.LG25.612
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
NPR1/NIM1 like defence protein C terminal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 21564073 | 21565670 | - | evm.TU.LG25.612 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.74 | 18,429.50 Da | 41.04 | 79.21 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00651 | BTB/POZ domain | 57 | 99 | 2.0E-8 | IPR000210 |
| SUPERFAMILY | SSF54695 | POZ domain | 55 | 99 | 1.41E-8 | IPR011333 |
| Gene3D | G3DSA:3.30.710.10 | Potassium Channel Kv1.1; Chain A | 31 | 148 | 7.2E-12 | IPR011333 |
| ProSiteProfiles | PS50097 | BTB domain profile. | 59 | 113 | 11.52292 | IPR000210 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64280.1 | regulatory protein (NPR1). This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens. | 0 |
| RefSeq | XP_021858538.1 | BTB/POZ domain and ankyrin repeat-containing protein NPR1 [Spinacia oleracea] | 0 |
| P93002 | Regulatory protein NPR1 OS=Arabidopsis thaliana OX=3702 GN=NPR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9DZC5 | BTB domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Brassica nigra | 1 | BniB06g016070.2N |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG25.612 |