Basic Information
Locus ID:
evm.TU.LG25.321
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
prolyl 4-hydroxylase 10
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 17006680 | 17022283 | + | evm.TU.LG25.321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 54,886.63 Da | 39.35 | 94.47 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16454 | RING-H2_PA-TM-RING | 449 | 491 | 1.95395E-16 | - |
| Pfam | PF13639 | Ring finger domain | 448 | 491 | 2.2E-11 | IPR001841 |
| Pfam | PF13640 | 2OG-Fe(II) oxygenase superfamily | 164 | 272 | 1.0E-15 | IPR044862 |
| SUPERFAMILY | SSF57850 | RING/U-box | 428 | 493 | 2.07E-19 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 413 | 494 | 5.1E-21 | IPR013083 |
| Gene3D | G3DSA:2.60.120.620 | q2cbj1_9rhob like domain | 76 | 272 | 2.9E-72 | - |
| SMART | SM00702 | p4hc | 84 | 280 | 1.1E-53 | IPR006620 |
| SMART | SM00184 | ring_2 | 449 | 490 | 1.7E-6 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 449 | 491 | 12.002429 | IPR001841 |
| ProSiteProfiles | PS51471 | Fe(2+) 2-oxoglutarate dioxygenase domain profile. | 160 | 294 | 10.904139 | IPR005123 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G66060.1 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein. | 0 |
| RefSeq | XP_039010490.1 | probable prolyl 4-hydroxylase 10 [Hibiscus syriacus] | 0 |
| F4JZ24 | Probable prolyl 4-hydroxylase 10 OS=Arabidopsis thaliana OX=3702 GN=P4H10 PE=3 SV=1 | 0 | |
| TrEMBL | A0A0D3E2R9 | Fe2OG dioxygenase domain-containing protein OS=Brassica oleracea var. oleracea OX=109376 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology