Basic Information
Locus ID:
evm.TU.LG25.1025
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Receptor-like cytosolic serine threonine-protein kinase RBK1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr25 | 27311625 | 27313957 | + | evm.TU.LG25.1025 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.06 | 51,460.35 Da | 47.08 | 83.44 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 152 | 414 | 1.8E-36 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 123 | 414 | 4.1E-69 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 106 | 223 | 5.8E-23 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 224 | 418 | 9.2E-56 | - |
| SMART | SM00220 | serkin_6 | 146 | 414 | 1.5E-16 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 146 | 428 | 32.866512 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 152 | 175 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 267 | 279 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 20 | 42 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 55 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65530.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_010680362.1 | receptor-like cytosolic serine/threonine-protein kinase RBK1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8H1D6 | Receptor-like cytosolic serine/threonine-protein kinase RBK1 OS=Arabidopsis thaliana OX=3702 GN=RBK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QAX2 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_207090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology