Basic Information
Locus ID:
evm.TU.LG24.486
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 17328760 | 17335314 | - | evm.TU.LG24.486 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 83,744.15 Da | 47.96 | 76.90 | -0.40 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd01989 | STK_N | 17 | 163 | 1.38485E-50 | - |
| CDD | cd14066 | STKc_IRAK | 431 | 691 | 1.04684E-85 | - |
| Pfam | PF00069 | Protein kinase domain | 427 | 678 | 2.2E-40 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 18 | 153 | 6.3E-9 | IPR006016 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 161 | 1.17E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 403 | 680 | 4.1E-69 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 498 | 702 | 4.3E-48 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 17 | 161 | 2.0E-10 | IPR014729 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 395 | 497 | 3.0E-26 | - |
| SMART | SM00220 | serkin_6 | 425 | 689 | 2.4E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 425 | 703 | 35.085548 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 543 | 555 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 171 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 325 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 209 | 225 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 306 | 323 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 727 | 751 | - | - |
| Coils | Coil | Coil | 323 | 350 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78940.3 | - | 0 |
| RefSeq | XP_021720015.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803KQL3 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology