Basic Information
Locus ID:
evm.TU.LG24.25
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr24 | 1139932 | 1143060 | - | evm.TU.LG24.25 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.47 | 66,685.43 Da | 35.74 | 65.47 | -0.46 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 18 | 148 | 5.27943E-46 | IPR033734 |
| CDD | cd09612 | Jacalin | 463 | 590 | 3.15247E-39 | IPR033734 |
| CDD | cd09612 | Jacalin | 266 | 394 | 1.38223E-34 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 18 | 149 | 2.7E-34 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 266 | 395 | 8.1E-29 | IPR001229 |
| Pfam | PF01419 | Jacalin-like lectin domain | 460 | 590 | 5.7E-30 | IPR001229 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 449 | 589 | 5.1E-41 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 256 | 394 | 4.19E-38 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 7 | 149 | 8.77E-43 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 442 | 590 | 1.8E-51 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 244 | 395 | 1.1E-47 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 1 | 147 | 4.1E-54 | IPR036404 |
| SMART | SM00915 | Jacalin_2 | 18 | 149 | 2.8E-42 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 266 | 396 | 6.1E-36 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 460 | 591 | 7.8E-42 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 255 | 396 | 45.487061 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 7 | 149 | 52.014984 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 449 | 591 | 46.75325 | IPR001229 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G19715.1 | Mannose-binding lectin superfamily protein. | 0 |
| RefSeq | XP_048495353.1 | jacalin-related lectin 3 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| F4HQX1 | Jacalin-related lectin 3 OS=Arabidopsis thaliana OX=3702 GN=JAL3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C8ZSC9 | Jacalin-related lectin 3-like OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology