Basic Information
Locus ID:
evm.TU.LG23.832
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 28967616 | 28975432 | + | evm.TU.LG23.832 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 69,899.65 Da | 33.50 | 94.91 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 68 | 1.4E-10 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 120 | 179 | 6.0E-9 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 301 | 567 | 4.2E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 571 | 5.93E-75 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 193 | 6.32E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 5.2E-54 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 588 | 2.6E-62 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 269 | 377 | 1.4E-34 | - |
| SMART | SM00220 | serkin_6 | 300 | 556 | 1.4E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 300 | 556 | 36.103195 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 420 | 432 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 306 | 329 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010687665.2 | probable LRR receptor-like serine/threonine-protein kinase At2g23950 isoform X2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q0WVM4 | Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS=Arabidopsis thaliana OX=3702 GN=At2g23950 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YD85 | Receptor protein serine/threonine kinase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology