Basic Information
Locus ID:
evm.TU.LG23.152
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
cationic amino acid transporter
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 8833029 | 8834938 | - | evm.TU.LG23.152 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.70 | 56,133.56 Da | 35.06 | 121.92 | 0.83 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 7 | 414 | 1.5E-41 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 445 | 495 | 1.4E-16 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 1 | 436 | 1.8E-90 | - |
| PIRSF | PIRSF006060 | AA_transporter | 379 | 511 | 0.045 | - |
| PIRSF | PIRSF006060 | AA_transporter | 1 | 427 | 3.9E-63 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_011041665.1 | PREDICTED: cationic amino acid transporter 1-like [Populus euphratica] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1Q3CPS5 | AA_permease_2 domain-containing protein/AA_permease_C domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_25554 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology