Basic Information
Locus ID:
evm.TU.LG23.144
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
UBP5
Description:
Belongs to the peptidase C19 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr23 | 8499067 | 8517808 | - | evm.TU.LG23.144 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 112,314.72 Da | 45.58 | 86.81 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02674 | Peptidase_C19R | 820 | 978 | 4.2123E-57 | - |
| Pfam | PF00443 | Ubiquitin carboxyl-terminal hydrolase | 377 | 977 | 2.1E-86 | IPR001394 |
| Pfam | PF06337 | DUSP domain | 99 | 203 | 3.5E-24 | IPR006615 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 375 | 979 | 5.1E-107 | IPR038765 |
| SUPERFAMILY | SSF143791 | DUSP-like | 75 | 203 | 8.63E-28 | IPR035927 |
| Gene3D | G3DSA:3.30.2230.10 | - | 65 | 215 | 5.0E-37 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 363 | 601 | 1.0E-66 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 216 | 301 | 5.1E-11 | - |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 652 | 987 | 4.6E-57 | - |
| SMART | SM00695 | dusp | 95 | 205 | 3.1E-30 | IPR006615 |
| ProSiteProfiles | PS51283 | DUSP domain profile. | 76 | 202 | 18.551861 | IPR006615 |
| ProSiteProfiles | PS50235 | Ubiquitin specific protease (USP) domain profile. | 377 | 980 | 56.540173 | IPR028889 |
| ProSitePatterns | PS00973 | Ubiquitin specific protease (USP) domain signature 2. | 922 | 939 | - | IPR018200 |
| ProSitePatterns | PS00972 | Ubiquitin specific protease (USP) domain signature 1. | 378 | 393 | - | IPR018200 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 338 | 366 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G40930.1 | ubiquitin-specific protease 5. Encodes ubiquitin-specific protease with nuclear localization signals that is likely to be involved in ubiquitin-mediated protein degradation. | 0 |
| RefSeq | XP_010684133.1 | ubiquitin carboxyl-terminal hydrolase 5 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| O22207 | Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana OX=3702 GN=UBP5 PE=1 SV=2 | 0 | |
| TrEMBL | A0A1L5JKB1 | Ubiquitin carboxyl-terminal hydrolase OS=Sesuvium portulacastrum OX=221166 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology