Basic Information
Locus ID:
evm.TU.LG22.881
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
E3 ubiquitin-protein ligase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 11011206 | 11024271 | - | evm.TU.LG22.881 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 200,742.31 Da | 49.69 | 82.94 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00078 | HECTc | 1473 | 1874 | 1.17319E-124 | IPR000569 |
| Pfam | PF00632 | HECT-domain (ubiquitin-transferase) | 1520 | 1879 | 1.1E-81 | IPR000569 |
| SUPERFAMILY | SSF48371 | ARM repeat | 189 | 658 | 2.34E-41 | IPR016024 |
| SUPERFAMILY | SSF56204 | Hect, E3 ligase catalytic domain | 1466 | 1872 | 3.53E-96 | IPR035983 |
| Gene3D | G3DSA:3.30.2410.10 | Hect, E3 ligase catalytic domain | 1764 | 1877 | 4.0E-32 | - |
| Gene3D | G3DSA:3.90.1750.10 | Hect, E3 ligase catalytic domains | 1415 | 1654 | 1.8E-45 | - |
| Gene3D | G3DSA:1.25.10.10 | - | 179 | 500 | 5.7E-52 | IPR011989 |
| SMART | SM00185 | arm_5 | 221 | 262 | 94.0 | IPR000225 |
| SMART | SM00185 | arm_5 | 347 | 385 | 8.3 | IPR000225 |
| SMART | SM00185 | arm_5 | 304 | 344 | 73.0 | IPR000225 |
| SMART | SM00119 | hect_3 | 1484 | 1879 | 1.2E-86 | IPR000569 |
| ProSiteProfiles | PS50237 | HECT domain profile. | 1497 | 1879 | 56.195843 | IPR000569 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 968 | 1175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 83 | 113 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 10 | 78 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 969 | 1015 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 662 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1053 | 1077 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 117 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 692 | 715 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1139 | 1175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1078 | 1115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1284 | 1310 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38600.1 | HEAT repeat ;HECT-domain (ubiquitin-transferase). encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content. | 0 |
| RefSeq | XP_021860892.1 | E3 ubiquitin-protein ligase UPL3 [Spinacia oleracea] | 0 |
| Q6WWW4 | E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana OX=3702 GN=UPL3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R9A0 | HECT-type E3 ubiquitin transferase OS=Spinacia oleracea OX=3562 GN=SOVF_097120 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology