Basic Information
Locus ID:
evm.TU.LG22.321
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
rho GTPase-activating protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 2872094 | 2888895 | + | evm.TU.LG22.321 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.18 | 94,952.51 Da | 57.53 | 74.51 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00821 | PH | 21 | 120 | 2.7954E-12 | - |
| CDD | cd00159 | RhoGAP | 181 | 318 | 1.4115E-34 | - |
| Pfam | PF14389 | Leucine-zipper of ternary complex factor MIP1 | 614 | 694 | 1.3E-21 | IPR025757 |
| Pfam | PF00169 | PH domain | 20 | 124 | 3.1E-13 | IPR001849 |
| Pfam | PF00620 | RhoGAP domain | 181 | 325 | 2.0E-31 | IPR000198 |
| SUPERFAMILY | SSF48350 | GTPase activation domain, GAP | 181 | 375 | 2.16E-34 | IPR008936 |
| SUPERFAMILY | SSF50729 | PH domain-like | 13 | 129 | 2.38E-18 | - |
| Gene3D | G3DSA:1.10.555.10 | Rho GTPase activation protein | 149 | 374 | 2.1E-42 | IPR008936 |
| Gene3D | G3DSA:2.30.29.30 | - | 10 | 127 | 6.5E-18 | IPR011993 |
| SMART | SM00324 | RhoGAP_3 | 178 | 369 | 7.8E-29 | IPR000198 |
| SMART | SM00233 | PH_update | 19 | 127 | 2.7E-16 | IPR001849 |
| ProSiteProfiles | PS50003 | PH domain profile. | 18 | 125 | 15.7531 | IPR001849 |
| ProSiteProfiles | PS50238 | Rho GTPase-activating proteins domain profile. | 172 | 372 | 30.124685 | IPR000198 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 459 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 779 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 748 | 776 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 452 | 495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 534 | 567 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 530 | 575 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 434 | - | - |
| Coils | Coil | Coil | 814 | 841 | - | - |
| Coils | Coil | Coil | 663 | 697 | - | - |
| Coils | Coil | Coil | 604 | 645 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G19390.1 | Rho GTPase activation protein (RhoGAP) with PH domain. Encodes a protein with similarity to REN1, a Rho GTPase activating protein. | 0 |
| RefSeq | XP_021734234.1 | rho GTPase-activating protein 7-like [Chenopodium quinoa] | 0 |
| Q8RWQ4 | Rho GTPase-activating protein 7 OS=Arabidopsis thaliana OX=3702 GN=ROPGAP7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9S053 | Rho GTPase-activating protein 7-like OS=Spinacia oleracea OX=3562 GN=SOVF_009250 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology