Basic Information
Locus ID:
evm.TU.LG22.1553
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr22 | 32553496 | 32556342 | + | evm.TU.LG22.1553 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.01 | 25,959.13 Da | 34.28 | 70.42 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 17 | 228 | 1.2E-85 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 116 | 218 | 1.57E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 113 | 231 | 9.7E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 119 | 219 | 24.537094 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 49 | 82 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021650935.1 | auxin-responsive protein IAA16-like isoform X1 [Hevea brasiliensis] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2C9VG25 | Auxin-responsive protein OS=Manihot esculenta OX=3983 GN=MANES_08G135000 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology