HalophFGD

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Basic Information
Locus ID: evm.TU.LG22.1408
Species & Taxonomic ID: Portulaca oleracea & 46147
Genome Assembly: GWHCBIU00000000
Description: Serine threonine-protein phosphatase 7 long form homolog
Maps and Mapping Data
Chromosome Start End Strand ID
chr22 25894365 25897637 - evm.TU.LG22.1408
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
6.56 57,244.58 Da 49.52 67.98 -0.44
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF10536 Plant mobile domain 109 243 9.5E-12 IPR019557
MobiDBLite mobidb-lite consensus disorder prediction 373 389 - -
MobiDBLite mobidb-lite consensus disorder prediction 361 423 - -
Best hit
Source Best Hit ID Description E-value
TAIR AT2G25010.1 Aminotransferase-like, plant mobile domain family protein. 0
RefSeq XP_028106146.1 protein MAINTENANCE OF MERISTEMS-like [Camellia sinensis] 0
TrEMBL A0A7J7FVM8 PMD domain-containing protein OS=Camellia sinensis OX=4442 GN=HYC85_028563 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Portulacaceae Portulaca oleracea 40 evm.TU.LG01.1647, evm.TU.LG01.964, evm.TU.LG01.995 ...
evm.TU.LG02.1665, evm.TU.LG02.1887, evm.TU.LG02.2086, evm.TU.LG03.1481, evm.TU.LG03.1584, evm.TU.LG03.2582, evm.TU.LG05.1304, evm.TU.LG05.1469, evm.TU.LG05.2155, evm.TU.LG05.2300, evm.TU.LG06.507, evm.TU.LG06.718, evm.TU.LG06.938, evm.TU.LG07.1205, evm.TU.LG07.1728, evm.TU.LG08.243, evm.TU.LG09.325, evm.TU.LG10.1454, evm.TU.LG10.1472, evm.TU.LG11.100, evm.TU.LG11.198, evm.TU.LG12.177, evm.TU.LG12.74, evm.TU.LG13.1564, evm.TU.LG13.1569, evm.TU.LG13.1658, evm.TU.LG16.1125, evm.TU.LG16.1180, evm.TU.LG16.1181, evm.TU.LG17.1103, evm.TU.LG17.1206, evm.TU.LG21.1256, evm.TU.LG22.1408, evm.TU.LG22.819, evm.TU.LG24.300, evm.TU.LG24.314, evm.TU.LG24.385
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.