halophFGD

Basic Information

Locus ID: evm.TU.LG22.1310

Species & Taxonomic ID: Portulaca oleracea & 46147

Genome Assembly: GWHCBIU00000000

Description: 60s ribosomal protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr22	22824075	22827023	+	evm.TU.LG22.1310

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.95	20,912.37 Da	34.07	84.44	-0.41

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF17135	Ribosomal protein 60S L18 and 50S L18e	2	187	1.3E-93	IPR021131
SUPERFAMILY	SSF52080	Ribosomal proteins L15p and L18e	20	139	3.53E-28	IPR036227
Gene3D	G3DSA:3.100.10.10	-	1	187	1.4E-99	-

KEGG Pathway

KO Term:

K02883 (large subunit ribosomal protein L18e)

Pathway:

ko03010 (Ribosome) map03010 (Ribosome)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G05590.1	ribosomal protein L18. Encodes cytoplasmic ribosomal protein L18.
RefSeq	XP_010674074.1	60S ribosomal protein L18-2 [Beta vulgaris subsp. vulgaris]
Swiss-Prot	P42791	Large ribosomal subunit protein eL18y OS=Arabidopsis thaliana OX=3702 GN=RPL18B PE=1 SV=2
TrEMBL	A0A7C8Z7W8	Ribosomal_L18e/L15P domain-containing protein OS=Opuntia streptacantha OX=393608 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	3	jg35164, jg37930, jg8909
Aizoaceae	Mesembryanthemum crystallinum	2	gene_10392, gene_6370
Amaranthaceae	Atriplex hortensis	3	Ah005715, Ah029415, Ah029416
Amaranthaceae	Beta vulgaris	2	BVRB_4g076000, BVRB_7g163580
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg1285, Sbi_jg17178, Sbi_jg35284, Sbi_jg61787
Amaranthaceae	Salicornia europaea	2	Seu_jg3430, Seu_jg439
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00015370, GOSA_00024397, GOSA_00026796
Amaranthaceae	Suaeda glauca	2	Sgl74090, Sgl77570
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007770, gene:ENSEOMG00000008760 ... gene:ENSEOMG00000031062, gene:ENSEOMG00000035938, gene:ENSEOMG00000040553, gene:ENSEOMG00000042559
Amaranthaceae	Chenopodium quinoa	5	CQ.Regalona.r1.4AG0007860, CQ.Regalona.r1.4BG0008000 ... CQ.Regalona.r1.7AG0012850, CQ.Regalona.r1.7AG0021760, CQ.Regalona.r1.7BG0014820
Anacardiaceae	Pistacia vera	2	pistato.v30008880, pistato.v30081600
Apiaceae	Apium graveolens	3	Ag10G01811, Ag2G02519, Ag9G02267
Arecaceae	Cocos nucifera	4	COCNU_01G001630, COCNU_12G002580, COCNU_16G003640 ... scaffold010452G000020
Arecaceae	Phoenix dactylifera	6	gene-LOC103696227, gene-LOC103703629, gene-LOC103721685 ... gene-LOC120105778, gene-LOC120106974, gene-LOC120107273
Asparagaceae	Asparagus officinalis	4	AsparagusV1_02.2148.V1.1, AsparagusV1_04.1389.V1.1 ... AsparagusV1_08.1454.V1.1, AsparagusV1_10.854.V1.1
Asteraceae	Flaveria trinervia	4	Ftri11G04124, Ftri12G10345, Ftri15G00353, Ftri3G14162
Brassicaceae	Arabidopsis thaliana	3	AT2G47570.1, AT3G05590.1, AT5G27850.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10004865m.g.v1.0, Thhalv10021598m.g.v1.0
Brassicaceae	Schrenkiella parvula	2	Sp2g20970.v2.2, Sp3g04470.v2.2
Brassicaceae	Brassica nigra	6	BniB01g058010.2N, BniB02g078970.2N, BniB04g004730.2N ... BniB07g032840.2N, BniB07g038700.2N, BniB07g062550.2N
Casuarinaceae	Casuarina equisetifolia	2	Ceq06G0982, Ceq06G1153
Casuarinaceae	Casuarina glauca	2	Cgl06G1012, Cgl06G1203
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno15g06210, gene.Cymno15g06300, gene.Cymno17g01210 ... gene.Cymno18g01160
Dunaliellaceae	Dunaliella salina	1	Dusal.0152s00012.v1.0
Hydrocharitaceae	Thalassia testudinum	3	gene.Thate01g03120, gene.Thate06g16680, gene.Thate07g09400
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.2491, evm.TU.LG04.373
Plantaginaceae	Plantago ovata	3	Pov_00023797, Pov_00024906, Pov_00036808
Plumbaginaceae	Limonium bicolor	4	Lb1G06502, Lb1G07594, Lb2G12654, Lb4G24504
Poaceae	Echinochloa crus-galli	9	AH01.3698, AH03.4043, AH05.1020, BH01.4049, BH03.4380 ... BH05.1070, CH01.4314, CH05.1220, CH07.136
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0247680, gene-QOZ80_3BG0280550 ... gene-QOZ80_5AG0404260, gene-QOZ80_7AG0581600, gene-QOZ80_7BG0612680
Poaceae	Lolium multiflorum	3	gene-QYE76_009996, gene-QYE76_010063, gene-QYE76_038797
Poaceae	Oryza coarctata	6	Oco05G013160, Oco06G013270, Oco09G002620, Oco10G002710 ... Oco13G015680, Oco14G016500
Poaceae	Oryza sativa	3	LOC_Os03g22180.1, LOC_Os05g06310.1, LOC_Os07g47780.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G359600, gene-BS78_02G388300 ... gene-BS78_09G056800
Poaceae	Puccinellia tenuiflora	4	Pt_Chr0102699, Pt_Chr0305525, Pt_Chr0305565, Pt_Chr0501925
Poaceae	Sporobolus alterniflorus	8	Chr01G012120, Chr04G011010, Chr12G024530, Chr18G000740 ... Chr19G000460, Chr22G014950, Chr24G012430, Chr27G017120
Poaceae	Thinopyrum elongatum	3	Tel1E01G203200, Tel2E01G236400, Tel4E01G254300
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG016800, gene_TRIDC1BG018140 ... gene_TRIDC2AG013110, gene_TRIDC2BG016120, gene_TRIDC4AG020120, gene_TRIDC4BG030350, gene_TRIDC7BG037350
Poaceae	Triticum aestivum	8	TraesCS1A02G096500.2, TraesCS1B02G127200.1 ... TraesCS1D02G105500.2, TraesCS2A02G109900.1, TraesCS2B02G127900.1, TraesCS2D02G110100.1, TraesCS4B02G166800.1, TraesCS4D02G169400.1
Poaceae	Zea mays	3	Zm00001eb282790_P004, Zm00001eb330480_P001 ... Zm00001eb346100_P001
Poaceae	Zoysia japonica	6	nbis-gene-110, nbis-gene-18156, nbis-gene-23448 ... nbis-gene-3321, nbis-gene-33230, nbis-gene-41661
Poaceae	Zoysia macrostachya	4	Zma_g26460, Zma_g27723, Zma_g5772, Zma_g7065
Portulacaceae	Portulaca oleracea	6	evm.TU.LG01.105, evm.TU.LG03.857, evm.TU.LG04.644 ... evm.TU.LG08.700, evm.TU.LG12.880, evm.TU.LG22.1310
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g07950, gene.Posoc04g17960, gene.Posoc07g11760
Rhizophoraceae	Bruguiera sexangula	4	evm.TU.Scaffold_1_RagTag.99, evm.TU.Scaffold_2_RagTag.2073 ... evm.TU.Scaffold_5_RagTag.842, evm.TU.Scaffold_9_RagTag.805
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-11497, nbisL1-mrna-21423, nbisL1-mrna-2887
Rhizophoraceae	Ceriops tagal	3	nbisL1-mrna-12847, nbisL1-mrna-14198, nbisL1-mrna-19971
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-11475, nbisL1-mrna-13670, nbisL1-mrna-18494
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000003l.596, evm.TU.utg000006l.206 ... evm.TU.utg000009l.46
Rhizophoraceae	Kandelia obovata	3	Maker00005041, Maker00009832, Maker00013573
Rhizophoraceae	Rhizophora apiculata	4	nbisL1-mrna-10092, nbisL1-mrna-12993, nbisL1-mrna-1575 ... nbisL1-mrna-7888
Rhizophoraceae	Rhizophora mangle	4	nbisL1-mrna-16140, nbisL1-mrna-5243, nbisL1-mrna-7469 ... nbisL1-mrna-90
Salicaceae	Populus euphratica	5	populus_peu13340, populus_peu15667, populus_peu27282 ... populus_peu31257, populus_peu31268
Solanaceae	Lycium barbarum	3	gene-LOC132603186, gene-LOC132610570, gene-LOC132645985
Solanaceae	Solanum chilense	2	SOLCI001828600, SOLCI006761100
Solanaceae	Solanum pennellii	2	gene-LOC107006365, gene-LOC107031740
Tamaricaceae	Reaumuria soongarica	3	STRG.32707_chr09_-, gene_4879, gene_7063
Tamaricaceae	Tamarix chinensis	2	TC01G0393, TC02G0844
Zosteraceae	Zostera marina	1	Zosma06g02920.v3.1