Basic Information
Locus ID:
evm.TU.LG21.698
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 10228392 | 10229441 | - | evm.TU.LG21.698 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 38,636.27 Da | 40.84 | 71.12 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 119 | 159 | 1.3E-6 | IPR006652 |
| Pfam | PF00646 | F-box domain | 14 | 56 | 1.8E-8 | IPR001810 |
| Pfam | PF01344 | Kelch motif | 162 | 207 | 5.8E-12 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 90 | 305 | 1.16E-40 | IPR015915 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 56 | 3.01E-9 | IPR036047 |
| Gene3D | G3DSA:2.120.10.80 | - | 83 | 321 | 1.3E-37 | IPR015915 |
| Gene3D | G3DSA:1.20.1280.50 | - | 7 | 55 | 2.0E-6 | - |
| SMART | SM00612 | kelc_smart | 173 | 220 | 7.6E-7 | IPR006652 |
| SMART | SM00612 | kelc_smart | 124 | 172 | 3.7E-5 | IPR006652 |
| SMART | SM00256 | fbox_2 | 16 | 56 | 2.2E-7 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 10 | 56 | 8.914593 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010693831.1 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A314YXD4 | F-box/kelch-repeat protein OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_03181 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology