Basic Information
Locus ID:
evm.TU.LG21.469
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Leucine-rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 6058286 | 6059467 | + | evm.TU.LG21.469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.82 | 42,912.05 Da | 39.28 | 98.24 | 0.01 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 143 | 157 | 0.094 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 25 | 64 | 5.5E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 47 | 369 | 3.29E-39 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 190 | 371 | 1.6E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 189 | 1.9E-33 | IPR032675 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G03440.1 | Leucine-rich repeat (LRR) family protein. | 0 |
| RefSeq | XP_021743935.1 | LRR receptor-like serine/threonine-protein kinase ERL1 [Chenopodium quinoa] | 0 |
| TrEMBL | A0A7C9CJH7 | 2-alkenal reductase (NAD(P)(+)) OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology