Basic Information
Locus ID:
evm.TU.LG21.310
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
(NAC) domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 3528621 | 3533491 | + | evm.TU.LG21.310 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.12 | 48,019.87 Da | 43.90 | 71.45 | -0.78 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02365 | No apical meristem (NAM) protein | 59 | 197 | 2.4E-22 | IPR003441 |
| SUPERFAMILY | SSF101941 | NAC domain | 43 | 216 | 2.22E-40 | IPR036093 |
| Gene3D | G3DSA:2.170.150.80 | NAC domain | 67 | 222 | 3.8E-32 | IPR036093 |
| ProSiteProfiles | PS51005 | NAC domain profile. | 58 | 216 | 32.991879 | IPR003441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 307 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 321 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 283 | 297 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G25580.1 | NAC (No Apical Meristem) domain transcriptional regulator superfamily protein. Encodes suppressor of gamma response 1 (SOG1), a putative transcription factor governing multiple responses to DNA damage. | 0 |
| RefSeq | XP_010695823.2 | SUPPRESSOR OF GAMMA RESPONSE 1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6NQK2 | SUPPRESSOR OF GAMMA RESPONSE 1 OS=Arabidopsis thaliana OX=3702 GN=SOG1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C8YLE4 | NAC domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology