Basic Information
Locus ID:
evm.TU.LG21.280
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 3027054 | 3030761 | - | evm.TU.LG21.280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 68,030.02 Da | 40.01 | 96.88 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 67 | 1.7E-12 | IPR013210 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 95 | 136 | 2.6E-6 | IPR025875 |
| Pfam | PF00069 | Protein kinase domain | 303 | 569 | 4.2E-44 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 29 | 192 | 9.64E-40 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 578 | 1.08E-75 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 210 | 4.2E-59 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 271 | 378 | 2.4E-38 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 591 | 8.4E-63 | - |
| SMART | SM00220 | serkin_6 | 302 | 557 | 9.4E-34 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 302 | 557 | 35.396496 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 120 | 143 | 7.33462 | IPR001611 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 308 | 330 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 421 | 433 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 589 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 604 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G16000.1 | NSP-interacting kinase 1. NSP-interacting kinase (NIK1), receptor-like kinase, involved in defense response against geminivirus It acts as a virulence target of the begomovirus nuclear shuttle protein (NSP). | 0 |
| RefSeq | XP_021755463.1 | LOW QUALITY PROTEIN: protein NSP-INTERACTING KINASE 1-like [Chenopodium quinoa] | 0 |
| Q9LFS4 | Protein NSP-INTERACTING KINASE 1 OS=Arabidopsis thaliana OX=3702 GN=NIK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803L7E6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology