Basic Information
Locus ID:
evm.TU.LG21.141
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Short Name:
WRKY4
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr21 | 1591312 | 1593710 | - | evm.TU.LG21.141 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 50,546.16 Da | 55.48 | 52.37 | -0.86 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 352 | 409 | 2.3E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 203 | 259 | 8.1E-26 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 343 | 411 | 8.24E-30 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 200 | 261 | 3.27E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 336 | 412 | 7.7E-36 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 190 | 262 | 1.0E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 202 | 260 | 2.0E-37 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 351 | 410 | 1.4E-39 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 203 | 261 | 23.513811 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 346 | 411 | 38.27375 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 294 | 322 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 166 | 191 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 33 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 415 | 434 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 417 | 434 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_021739996.1 | probable WRKY transcription factor 3 [Chenopodium quinoa] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A7C9DC04 | WRKY transcription factor 3 OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology