Basic Information
Locus ID:
evm.TU.LG20.982
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 13999862 | 14003620 | - | evm.TU.LG20.982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.06 | 57,520.82 Da | 40.85 | 95.63 | 0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 45 | 364 | 3.3E-74 | IPR000490 |
| Pfam | PF07983 | X8 domain | 382 | 453 | 1.5E-20 | IPR012946 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 45 | 364 | 4.31E-81 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 44 | 369 | 4.6E-108 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 375 | 493 | 7.4E-12 | - |
| SMART | SM00768 | X8_cls | 381 | 466 | 2.6E-49 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 279 | 292 | - | IPR000490 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021719723.1 | glucan endo-1,3-beta-glucosidase 1-like [Chenopodium quinoa] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9QUE2 | X8 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_140130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology