Basic Information
Locus ID:
evm.TU.LG20.875
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 10935523 | 10948632 | + | evm.TU.LG20.875 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.14 | 51,636.08 Da | 41.86 | 88.33 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 100 | 261 | 2.5E-26 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 78 | 276 | 1.2E-45 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 171 | 281 | 2.3E-27 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 67 | 170 | 1.6E-18 | - |
| SMART | SM00220 | serkin_6 | 97 | 461 | 6.2E-12 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 97 | 388 | 21.955061 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 103 | 125 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 216 | 228 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 397 | 433 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 370 | 389 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24130.1 | Leucine-rich receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_010687636.3 | putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9ZUI0 | Putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g24130 OS=Arabidopsis thaliana OX=3702 GN=At2g24130 PE=3 SV=1 | 0 | |
| TrEMBL | A0A2K2A448 | Protein kinase domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G181200 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Portulacaceae | Portulaca oleracea | 17 | evm.TU.LG01.1698, evm.TU.LG02.2476, evm.TU.LG03.1864 ... |