Basic Information
Locus ID:
evm.TU.LG20.760
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 8612509 | 8614796 | - | evm.TU.LG20.760 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.19 | 54,074.82 Da | 39.46 | 86.22 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 359 | 430 | 1.2E-18 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 33 | 343 | 3.0E-70 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 25 | 345 | 7.51E-74 | IPR017853 |
| Gene3D | G3DSA:1.20.58.1040 | - | 355 | 450 | 6.3E-9 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 24 | 352 | 7.2E-107 | - |
| SMART | SM00768 | X8_cls | 358 | 443 | 4.3E-45 | IPR012946 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G13560.1 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021771931.1 | glucan endo-1,3-beta-glucosidase 4-like [Chenopodium quinoa] | 0 |
| Q94CD8 | Glucan endo-1,3-beta-glucosidase 4 OS=Arabidopsis thaliana OX=3702 GN=At3g13560 PE=2 SV=1 | 0 | |
| TrEMBL | A0A7C9D561 | Glucan endo-1,3-beta-D-glucosidase OS=Opuntia streptacantha OX=393608 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology