Basic Information
Locus ID:
evm.TU.LG20.549
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Nascent polypeptide-associated complex subunit alpha-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 5508909 | 5509443 | + | evm.TU.LG20.549 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.54 | 16,599.72 Da | 52.89 | 70.33 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14358 | UBA_NAC_euk | 113 | 149 | 3.87144E-16 | - |
| Pfam | PF19026 | HYPK UBA domain | 110 | 149 | 1.9E-12 | IPR044034 |
| Pfam | PF01849 | NAC domain | 1 | 50 | 4.0E-17 | IPR002715 |
| Gene3D | G3DSA:2.20.70.30 | - | 1 | 53 | 2.3E-28 | IPR038187 |
| Gene3D | G3DSA:1.10.8.10 | - | 111 | 148 | 1.2E-17 | - |
| SMART | SM01407 | NAC_2 | 1 | 50 | 1.6E-14 | IPR002715 |
| PIRSF | PIRSF015901 | NAC_alpha | 1 | 150 | 1.7E-54 | IPR016641 |
| ProSiteProfiles | PS51151 | NAC A/B domain profile. | 1 | 56 | 14.098515 | IPR002715 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 115 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 97 | 111 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49470.1 | nascent polypeptide-associated complex subunit alpha-like protein 2. | 0 |
| RefSeq | XP_050156157.1 | nascent polypeptide-associated complex subunit alpha-like protein 2 [Malus sylvestris] | 0 |
| Q94JX9 | Nascent polypeptide-associated complex subunit alpha-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At3g49470 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7C9DG95 | NAC-A/B domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology