Basic Information
Locus ID:
evm.TU.LG20.501
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 4817912 | 4822300 | + | evm.TU.LG20.501 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.51 | 74,650.43 Da | 45.37 | 93.77 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 48 | 85 | 2.8E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 395 | 646 | 2.4E-19 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 113 | 171 | 7.6E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 54 | 231 | 2.12E-32 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 395 | 646 | 1.11E-34 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 359 | 464 | 1.4E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 466 | 652 | 1.4E-27 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 44 | 254 | 4.6E-42 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 382 | 650 | 15.326217 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 276 | 309 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010686215.2 | protein MALE DISCOVERER 1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9B8X1 | Protein kinase domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology