Basic Information
Locus ID:
evm.TU.LG20.1466
Species & Taxonomic ID:
Portulaca oleracea & 46147
Genome Assembly:
GWHCBIU00000000
Description:
Acyl-CoA N-acyltransferase with RING FYVE PHD-type zinc finger domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr20 | 33589935 | 33637989 | - | evm.TU.LG20.1466 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.95 | 117,871.53 Da | 50.11 | 79.75 | -0.32 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd15539 | PHD1_AIRE | 715 | 755 | 3.27274E-19 | - |
| Pfam | PF00628 | PHD-finger | 716 | 757 | 1.2E-8 | IPR019787 |
| Pfam | PF16135 | Tify domain binding domain | 649 | 699 | 1.4E-15 | IPR032308 |
| Pfam | PF16135 | Tify domain binding domain | 300 | 355 | 7.5E-11 | IPR032308 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 803 | 857 | 1.19E-9 | IPR011011 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 711 | 761 | 3.5E-15 | IPR011011 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 956 | 1054 | 4.78E-5 | IPR016181 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 799 | 862 | 6.4E-12 | IPR013083 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 702 | 780 | 3.3E-18 | IPR013083 |
| SMART | SM00249 | PHD_3 | 715 | 756 | 5.8E-13 | IPR001965 |
| SMART | SM00249 | PHD_3 | 803 | 859 | 0.0072 | IPR001965 |
| ProSiteProfiles | PS50016 | Zinc finger PHD-type profile. | 713 | 758 | 10.433399 | IPR019787 |
| ProSitePatterns | PS01359 | Zinc finger PHD-type signature. | 716 | 755 | - | IPR019786 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 483 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 438 | 502 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 555 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 593 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 453 | 472 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 578 | 604 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 539 | 562 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G36720.1 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain. | 0 |
| RefSeq | XP_021774585.1 | uncharacterized protein LOC110738482 [Chenopodium quinoa] | 0 |
| Q6PDQ2 | Chromodomain-helicase-DNA-binding protein 4 OS=Mus musculus OX=10090 GN=Chd4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9EA64 | PHD-type domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology